DIversité - Adaptation - DEveloppement des plantes


Dagallier LPMJ, Janssens SB, Blach-Overgaard A, Mackinder BA, Droissart V, Svenning JC, Sosef MSC, Stévart T, Harris DJ, Sonké B, Wieringa JJ, Hardy OJ, Couvreur TLP (2020) Cradles and museums of generic plant diversity across tropical Africa. New Phytologist 225:2196-2213

Donkpegan AS, Pineiro R, Heuertz M, Duminil J, Daïnou K, Doucet JL, Hardy OJ (2020) Population genomics of the widespread African savannah trees Afzelia africana and Afzelia quanzensis reveals no significant past fragmentation of their distribution ranges. American Journal of Botany 107:498-509

Escobar-Torrez K, Ledru MP, Ortuño T, Lombardo U, Renno JF (2020) Landscape changes in the southern Amazonian foreland basin during the Holocene inferred from Lake Ginebra, Beni, Bolivia Quaternary Research 94:46-60

Garcia-Davila C, Aldana Gomero D, Renno JF, Diaz Soria R, Hidalgo Pizango G, Flores Llampazo G, Castro-Ruiz D, Mejia de Loayza E, Angulo Chavez C, Mader M, Tysklind N, Paredes-Villanueva K, del Castillo Torres D, Degen B, Honorio Coronado EN (2020) Molecular evidence for three genetic species of Dipteryx in the Peruvian Amazon Genetica 148:1111

Hauser M, Duponchelle F, Hermann TW, Limburg KE, Castello L, Stewart DJ, Torrente-Vilara G, Garcia-Vasquez A, Garcia-Davila C, Pouilly M, Pecheyran C, Ponzevera E, Renno JF, Moret AS, Doria CRC (2020) Unmasking continental natal homing in goliath catfish from the upper Amazon. Freshwater Biology 65:325-336

Jankowski F, Louafi S, Kane NA, Diol M, Camara AD, Pham JL, Berthouly-Salazar C, Barnaud, A (2020) From texts to enacting practices: defining fair and equitable research principles for plant genetic resources in West Africa. Agriculture and Human Values In press

Janssens SB, Couvreur TLP, Mertens A, Dauby G, Dagallier LP, Abeele SV, Vandelook F, Mascarello M, Beeckman H, Sosef M, Droissart V, van der Bank M, Maurin O, Hawthorne W, Marshall C, Réjou-Méchain M, Beina D, Baya F, Merckx V, Verstraete B, Hardy O (2020) A large-scale species level dated angiosperm phylogeny for evolutionary and ecological analyses. Biodiversity Data Journal 8: e39677

Kamga SM, Brokamp G, Cosiaux A, Awono A, Fürniss S, Barfod AS, Muafor FJ, Le Gall P, Sonké B, Couvreur TLP (2020) Use and Cultural Significance of Raphia Palms. Economic Botany In press

Kusuma J, Scarcelli N, Couderc M, Mariac C, Zekraoui L, Duminil J (2020) Microsatellite markers development for Indonesian nutmeg (Myristica fragrans Houtt.) and transferability to other Myristicaceae spp. Molecular Biology Reports In press

Labouisse JP, Cubry P, Austerlitz F, Rivallan R, Nguyen HA (2020) New insights on spatial genetic structure and diversity of Coffea canephora (Rubiaceae) in Upper Guinea based on old herbaria. Plant Ecology and Evolution 153:82-100

Rimlinger A, Marie L, Avana ML, Bouka GUD, Zekraoui L, Mariac C, Carrière SM, Duminil J (2020) New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa. Molecular Biology Reports In press



Akaffou SD, Kouame AK, Gore NBB, Abessika GY, Kouassi HK, Hamon P, Sabatier S, Duminil J (2019) Effect of the seeds provenance and treatment on the germination rate and plants growth of four forest trees species of Côte d'Ivoire Journal of Forestry Research In press

Bethune K, Mariac C, Couderc M, Scarcelli N, Santoni S, Ardisson M, Martin JF, Montúfar R, Klein V, Sabot F, Vigouroux Y, Couvreur TLP (2019) Long‐fragment targeted capture for long‐read sequencing of plastomes. Applications in Plant Sciences 7: e1243

Burgarella C, Barnaud A, Kane NA, Jankowski F, Scarcelli N, Billot C, Vigouroux Y, Berthouly-Salazar C (2019) Adaptive Introgression: An Untapped Evolutionary Mechanism for Crop Adaptation. Frontiers in Plant Science 10:1-17

Couvreur TLP, Helmstetter AJ, Koenen EJM, Bethune K, Brandão RD, Little SA, Sauquet H, Erkens RHJ (2019) Phylogenomics of the Major Tropical Plant Family Annonaceae Using Targeted Enrichment of Nuclear Genes. Frontiers in Plant Science 9:1941

Enquist BJ, Feng X, Boyle B, Maitner B, Newman EA, Jorgensen PM, Roehrdanz PR, Thiers BR, Burger JR, Corlett RT, Couvreur TLP, Dauby G, Donoghue JC, Foden W, Lovett JC, Marquet PA, Merow C, Midgley G, Morueta-Holme N, Neves DN, Oliveira-Filho RT, Kraft NJB, Park DS, Peet RK, Pillet M, Serra-Diaz JM, Sandel B, Schildhauer M, Simova I, Violle C, Wieringa JJ, Wiser SK, Hannah L, Svenning JC, McGill BJ (2019) The commonness of rarity: Global and future distribution of rarity across land plants. Science Advances 5:eaaz0414

Fustier MA, Martinez-Ainsworth NE, Aguirre-Liguori JA, Venon A, Corti H, Rousselet A, Dumas F, Dittberner H, Camarena MG, Grimanelli D, Ovaskainen O, Falque M, Moreau L, de Meaux J, Montes-Hernandez S, Eguiarte LE, Vigouroux Y, Manicacci D, Tenaillon MI (2019) Common gardens in teosintes reveal the establishment of a syndrome of adaptation to altitude. PLoS Genet 15: e1008512

Hardy OJ, Delaide B, Hainaut H, Gillet JF, Gillet P, Kaymak E, Vankerckhove N, Duminil J, Doucet JL (2019) Seed and pollen dispersal distances in two African legume timber trees and their reproductive potential under selective logging Molecular Ecology 25(12):3119-3134

Hauser M, Doria CRC, Santos RV, Garcia-Vasquez A, Pouilly M, Pecheyran C, Ponzevera E, Torrente-Vilara G, Berail S, Panfili J, Darnaude A, Renno JF, Garcia-Davila C, Nunez J, Ferraton F, Vargas G, Duponchelle F (2019) Shedding light on the migratory patterns of the Amazonian goliath catfish, Brachyplatystoma platynemum, using otolith 87Sr/86Sr analyses. Aquatic Conservation: Marine and Freshwater Ecosystems 29:397-408

Gorel AP, Duminil J, Doucet JL, Fayolle A (2019) Ecological niche divergence associated with species and populations differentiation in Erythrophleum (Fabaceae, Caesalpinioideae) Plant Ecology and Evolution 152(1):41-52

Kamga SM, Sonké B, Couvreur TLP (2019) Raphia vinifera (Arecaceae; Calamoideae): Misidentified for far too long. Biodiversity Data Journal 7:e37757

Lissambou BJ, Couvreur TLP, Atteke C, Stévart T, R Pineiro, Dauby G, Monthe FK, Ikabanga DU, Sonké B, M'batchi B, Hardy OJ (2019) Species delimitation in the genus Greenwayodendron based on morphological and genetic markers reveals new species. Taxon 68:442-454

Loiseau O, Olivares I, Paris M, de La Harpe M, Weigand A, Koubínová D, Rolland J, Bacon CD, Balslev H, Borchsenius F, Cano A, Couvreur TLP, Delnatte C, Fardin F, Gayot M, Mejía F, Mota-Machado T, Perret M, Roncal J, Sanin MJ, Stauffer F, Lexer C, Kessler M, Salamin N (2019) Targeted capture of hundreds of nuclear genes unravels phylogenetic relationships of the diverse neotropical palm tribe Geonomateae. Frontiers in Plant Science 10:864

Magwé-Tindo J, Wieringa JJ, Sonké B, Zapfack L, Vigouroux Y, Couvreur TLP, Scarcelli N (2019) Complete plastome sequences of 14 African yam species (Dioscorea spp.). Mitochondrial DNA part B 4(1): 74-76

Mercer KL, Vigouroux Y, Castaneda-Alvarez NP, de Haan S, Hijmans RJ, Leclerc C, McKey D, Vanek SJ (2019) Crop evolutionary agroecology genetic and functional dimensions of agrobiodiversity and associated knowledge. In: Agrobiodiversity: Integrating knowledge for a sustainable future. Zimmerer KS, de Haan S (Eds.). The MIT press, Cambridge, Massachussetts, USA. pp. 21-62

Merot-L’anthoene V, Tournebize R, Darracq O, Rattina V, Lepelley M, Bellanger L, Tranchant-Dubreuil C, Coulee M, Pegard M, Metairon S, Fournier C, Stoffelen P, Janssens SB, Kiwuka C, Musoli P, Sumirat U, Legnate H, Kambale JL, Ferreira da Costa Neto J, Revel C, De Kochko A, Descombes P, Crouzillat D, Poncet V (2019) Development and evaluation of a genome-wide Coffee 8.5K SNP array and its application for high-density genetic mapping and for investigating the origin of Coffea arabica L. Plant Biotechnology Journal 17:1418-1430

Migliore J, Kaymak E, Mariac C, Couvreur TLP, Lissambou BJ, Piñeiro R, Hardy OJ (2019) Pre-Pleistocene origin of phylogeographical breaks in African rain forest trees: New insights from Greenwayodendron (Annonaceae) phylogenomics. Journal of Biogeography 46(1):212-223

Monthe F, Migliore J, DuminilJ, Bouka G, Demenou B, Doumenge C, Blanc-Jolivet C, Ekué M, Hardy OJ (2019) Phylogenetic relationships in two African Cedreloideae genera (Meliaceae) reveal multiple rain/dry forest transitions. Perspectives in Plant Ecology, Evolution and Systematics 37:1-10

Neji M, Gorel A, Ojeda Alayon D, Duminil J, Kastally C, Steppe K, Fayolle A, Hardy O (2019) Comparative analysis of two sister Erythrophleum species (Leguminosae) reveal contrasting transcriptome-wide responses to early drought stress. Gene 694:50-62

Olodo KF, Gueye MC, Calatayud C, Diop BM, Kane NA, Ngom A, Ntui VO, Barreto MMS, Uyoh EA, Abraham S, Vigouroux Y, Billot c, Barnaud A (2019) EST-SSR development for Digitaria exilis and its relatives D. iburua and D. longiflora from transcriptome sequences Plant Genetic Resources 17:280-284

Onstein RE, Kissling WD, Chatrou LW, Couvreur TLP, Morlon H, Sauquet H (2019) Which frugivory-related traits facilitated historical long-distance dispersal in the custard apple family (Annonaceae)? Journal of Biogeography 46(8):1874-1888

Poncet V, Birnbaum P, Burtet-Sarramegna V, de Kochko A, Fogliani B, Gâteblé G, Isnard S, Jaffré T, Job D, Munoz F, Munzinger J, Scutt CP, Tournebize R, Trueba S, Pillon Y (2019) Amborella - Bearing witness to the past? Annual Plant Reviews Online 3:1-41

Rimlinger A, Carrière SM, Avana M-L, Nguegang A, Duminil J (2019) The Influence of Farmers’ Strategies on Local Practices, Knowledge, and Varietal Diversity of the Safou Tree (Dacryodes edulis) in Western Cameroon. Economic Botany 73(2):249‑264

Scarcelli N, Cubry P, Akakpo R, Thuillet AC, Obidiegwu J, Baco MN, Otoo E, Sonké B, Dansi A, Djedatin G, Mariac C, Couderc M, Causse S, Alix K, Chaïr H, François O, Vigouroux Y (2019) Yam genomics supports West Africa as a major cradle of crop domestication. Science Advances 5(5):eaaw1947

Stévart T, Dauby G, Lowry PP, Blach-Overgaard A, Droissart V, Harris DJ, Mackinder BA, Schatz GE, Sonké B, Sosef MSM, Svenning JC, Wieringa JJ, Couvreur TLP (2019) A third of the tropical African flora is potentially threatened with extinction. Science Advances 5:eaax9444

Tournebize R, Poncet V, Jakobsson M, Vigouroux, Manel S (2019) McSwan: a joint site frequency spectrum method to detect and date selective sweeps across multiple population genomes. Molecular Ecology Ressource 19(1):283-295

Varshney RK, Thudi M, Roorkiwal M, He W, Upadhyaya HD, Yang W, Bajaj P, Cubry P, Rathore A, Jian J, Doddamani D, Khan AW, Garg V, Chitikineni A, Xu D, Gaur PM, Singh NP, Chaturvedi SK, Nadigatla GVPR, Krishnamurthy L, Dixit GP, Fikre A, Kimurto PK, Sreeman SM, Bharadwaj C, Tripathi S, Wang J, Lee SH, Edwards D, Polavarapu KKB, Penmetsa RV, Crossa J, Nguyen HT, Siddique KHM, Colmer TD, Sutton T, von Wettberg E, Vigouroux Y, Xu X, Liu X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits Nature Genetics 51:857-864

Vignal A, Boitard S, Thébault N, Dayo GK, Yapi-Gnaore V, Karim IYA, Berthouly-Salazar C, Pálinkás-Bodzsár N, Guémené D, Thibaud-Nissen F, Warren WC, Tixier-Boichard M, Rognon X (2019) A guinea fowl genome assembly provides new evidence on evolution following domestication and selection in galliformes Molecular Ecology Resources 19(4):997-1014

Vigouroux Y, Leclerc C, de Haan S (2019) How does population genetics contribute to an understanding of the evolution of agrobiodiversity? In: Agrobiodiversity: Integrating knowledge for a sustainable future. Zimmerer KS, de Haan S (Eds.). The MIT press, Cambridge, Massachussetts, USA. pp. 63-77



Assoumane A, Blay C, Sanda AA, Mariac C, Pham JL, Bezançon G, Vigouroux Y (2018) Wild crop relative populations hot-spots of diversity are hot-spots of introgression in the case of pearl millet. Genetic Resources and Crop Evolution 65:1187-1194

Burgarella C, Cubry P, Kane NA, Varshney RK, Mariac C, Liu X, Shi C, Thudi M, Couderc M, Xu X , Chitikineni A, Scarcelli N, Barnaud A, Rhoné B, Dupuy C, François O, Berthouly-Salazar C, Vigouroux Y (2018) A western Sahara origin of African agriculture inferred from pearl millet genomes. Nature Ecology and Evolution 2:1377-1380

Cosiaux A, Gardiner LM, Stauffer FW, Bachman SP, Sonké B, Baker WJ, Couvreur, TLP (2018) Low extinction risk for an important plant resource: Conservation assessments of continental African palms (Arecaceae/Palmae). Biological Conservation 221:323-333

Cubry P, Tranchant-Dubreuil C, Thuillet AC, Monat C, Ndjiondjop MN, Labadie MN, Cruaud C, Engelen S, Scarcelli N, Rhoné B, Burgarella C, Dupuy C, Larmande P, Wincker P, François O, Sabot F, Vigouroux Y (2018) The rise and fall of African rice cultivation revealed by analysis of 246 new genomes. Current Biology 28:2274-2282.e6

Debieu M, Sine B, Passot S, Grondin A, Akata E, Gangashetty PI, Vadez V, Gantet P, Foncéka D, Cournac L, Hash CT, Kane N, Vigouroux Y, Laplaze L (2018) Response to early drought stress and identification of QTLs controlling biomass production under drought in pearl millet. PlosOne 13(10):e0201635

Diop BM, Guèye MC, Agbangba C, Emile CN, Deu M, Diack O, Fofana A, Kane NA, Ndir KN, Ndoye I, Ngom A, Leclerc C, Piquet M, Vigouroux Y, Zekraoui L, Billot C, Barnaud A (2018) Fonio (Digitaria exilis (Kippist) Stapf): a socially embedded cereal for food and nutrition security in Senegal. Ethnobiology letters 9(2): 150-165

Droissart V, Dauby G, Hardy OJ, Deblauwe V, Harris DJ, Janssens S, Mackinder BA, Blach-Overgaard A, Sonké B, Sosef MSM, Stévart T, Svenning JC, Wieringa JJ, Couvreur TLP (2018) Beyond trees: Biogeographical regionalization of tropical Africa. J Biogeogr. 45:1153-1167

Garine E, Barnaud A, Raimond C (2018) Growing a shared landscape - Plants and humans over generations among the Duupa farmers of northern Cameroon. In: Hybrid communities - Biosocial approaches to domestication and other trans-species relationships. Stépanoff C, Vigne JD (Eds.). Routledge, London, UK.

Jalonen R, Valette M, Boshier D, Duminil J, Thomas E (2018) Forest and landscape restoration severely constrained by a lack of attention to the quantity and quality of tree seed: Insights from a global survey. Conservation Letters 11:e12424

Kamga SM, Niangadouma R, Stauffer FW, Sonké B, Couvreur TLP (2018) Two new species of Raphia. PhytoKeys 111: 17-30

Lissambou BJ, Hardy OJ, Atteke C, Stevart T, Dauby G, Mbatchi B, Sonke B, Couvreur TLP (2018) Taxonomic revision of the African genus Greenwayodendron (Annonaceae). PhytoKeys 114: 55-93

Magwé-Tindo J, Wieringa JJ, Sonké B, Zapfack L, Vigouroux Y, Couvreur TLP, Scarcelli N (2018) Guinea yam (Dioscorea spp.) wild relatives identified using whole plastome phylogenetic analyses. Taxon 67(5):905-915

Mariac C, Vigouroux Y, Duponchelle F, García-Dávila C, Nunez J, Desmarais E, Renno JF (2018) Metabarcoding by Capture using a Single COI probe (MCSP) to identify and quantify fish species in ichthyoplankton swarms. PlosOne. 12-13(9):e0202976./journal.pone.0202976

Monthe FK, Duminil J, Yakusu EK, Beeckman H, Bourland N, Doucet JL, Sosef MSM, Hardy OJ (2018) The African timber tree Entandrophragma congoense (Pierre ex De Wild.) A.Chev. is morphologically and genetically distinct from Entandrophragma angolense (Welw.) C.DC. Tree Genetics and Genomes 14:66

Ngom A, Gueye MC, Gueye M, Billot C, Calatayud C, Diop BM, Kane NA, Piquet M, Vigouroux Y, Zekraoui L, Mbaye MS, Noba K, Barnaud A(2018) Cross-species amplification of microsatellite loci developed for Digitaria exilis Stapf in related Digitaria species. Journal of Applied Biosciences 129:12982-12995

Olodo KF, Gueye MC, Calatayud C, Diop BM, Kane NA, Ngom A, Ntui VO, Barreto MMS, Uyoh EA, Abraham S, Vigouroux Y, Billot C, Barnaud (2018) EST-SSR development for Digitaria exilis (Poaceae) and its relatives D. iburua and D. longiflora from transcriptome sequences. Plant Genet Res. 1-5

Onstein RE, Baker WJ, Couvreur TLP, Faurby S, Herrera-Alsina L, Svenning JC, Kissling WD (2018) To adapt or go extinct? The fate of megafaunal palm fruits under past global change. Proc. Royal Soc. B 285:20180882

Veranso-Libalah MC, Kadereit G, Stone RD, Couvreur TLP (2018) Multiple shifts to open habitats in Melastomateae (Melastomataceae) congruent with the increase of African Neogene climatic aridity. J. Biogeogr. 45:1420-1431


Akakpo R, Scarcelli N, Chair H, Dansi A, Djedatin G, Thuillet AC, Rhone B, Francois O, Alix K, Vigouroux Y (2017) Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes. BMC Genomics 18:782

Ambrósio Moreira P, Mariac C, Zekraoui L, Couderc M, Garcia Luize B, Picanço DR, Clement CR, Vigouroux Y (2017) Human management and hybridization shape treegourd fruits in the Brazilian Amazon Basin. Evolutionary Applications 10(6):577-589

Azani N, [...] Duminil J et al. [The Legume Phylogeny Working Group (LPWG)] (2017) A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny. Taxon 66(1):44-77

Barnaud A, Vigouroux Y, Diallo MT, Saidou S, Piquet M, Barry MB, Bakasso Y, Zekraoui L, Rivallan R, Kane NA, Billot C (2017) High selfing rate inferred for white fonio [Digitaria exilis (Kippist.) Stapf] reproductive system opens up opportunities for breeding programs. Genet. Res. Crop. Evol 34:1485-1490

Burgarella C, Glémin S (2017) Population genetics and genome evolution of selfing species. eLS. In press

Clément Y, Sarah G, Holtz Y, Homa F, Pointet S, Contreras S, Nabholz B, Sabot F, Sauné L, Ardisson M, Bacilieri R, Besnard G, Berger A, Cardi C, De Bellis F, Fouet O, Jourda C, Khadari B, Lanaud C, Leroy T, Pot D, Sauvage C, Scarcelli N, Tregear J, Vigouroux Y, Yahiaoui N, Ruiz M, Santoni S, Labouisse JP, Pham JL, David J, Glémin S (2017) Evolutionary forces affecting synonymous variations in plant genomes. Plos Genetics 13(5):e1006799

Cosiaux A, Gardiner LM, Ouattara DN, Stauffer FW, Sonké B, Couvreur TLP (2017) An endangered West African rattan palm: Eremospatha dransfieldii. Biodivers Data J 5:e11176

Cubry P, Scotti I, Oddou-Muratorio S, Lefevre F (2017) Generalization of the Q(ST) framework in hierarchically structured populations: Impacts of inbreeding and dominance. Molecular Ecology Resources 17:e76-e83

Cubry P, Vigouroux Y, François O (2017) The Empirical Distribution of Singletons for Geographic Samples of DNA Sequences. Frontiers in Genetics 8:139

Dauby G, Stévart T, Droissart V, Cosiaux A, Deblauwe V, Simo-Droissart M, Sosef MSM, Lowry II PP, Schatz GE, Gereau RE, Couvreur TLP (2017) ConR: An R package to assist large-scale multispecies preliminary conservation assessments using distribution data. Ecol Evol. 7:11292-11303

Diack O, Kane NA , Berthouly-Salazar C, Guèye MC, Diop BM, Fofana A, Sy O, Tall H, Zékraoui L, Piquet M, Couderc M, Vigouroux Y, Diouf D, Barnaud A (2017) New genetic insights into pearl millet diversity as revealed by characterization of early- and late-flowering landraces from Senegal. Front. Plant Sci. 8:818

Donkpegan ASL, Doucet J-L, Duminil J, Daïnou K, Pineiro R, Wieringa J, Champluvier D, Hardy OJ (2017) Evolution in African tropical trees displaying ploidy-habitat association: The genus Afzelia (Leguminosae). Molecular Phylogenetic and Evolution 107:270-281

Eiserhardt WL, Couvreur TLP, Baker WJ (2017) Plant phylogeny as a window on the evolution of hyperdiversity in the tropical rainforest biome. New Phytologist 214(4):1408-1422

Fustier MA, Brandenburg J, Boitard S, Lapeyronnie J, Eguiarte LE, Vigouroux Y, Manicacci D, Tenaillon MI (2017). Signatures of local adaptation in lowland and highland teosintes from whole-genome sequencing of pooled samples. Molecular Ecology 26(10):2738-2756

Ghogue JP, Sonké B, Couvreur TLP (2017) Taxonomic revision of the African genera Brieya and Piptostigma (Annonaceae). Plant Ecology and Evolution 150:173-216

Glato K, Aidam A, Kane NA, Bassirou D, Couderc M, Zekraoui L, Scarcelli N, Barnaud A, Vigouroux Y (2017) Structure of sweet potato (Ipomoea batatas) diversity in West Africa covaries with a climatic gradient. PLoS One 12(5):e0177697

Gros-Balthazard M, Galimberti M, Kousathanas A, Newton C, Ivorra S, Paradis L, Vigouroux Y, Carter R, Tengberg M, Battesti V, Santoni S, Falquet L, Pintaud J-C, Terral J-F, Wegmann D (2017) The discovery of wild date palms in Oman reveals a complex domestication history involving centers in the Middle East and Africa. Current Biology 27:2211-2218.e8

Guo X, Tang CC, Thomas DC, Couvreur TLP, Saunders RMK (2017) A mega-phylogeny of the Annonaceae: taxonomic placement of five enigmatic genera and support for a new tribe, Phoenicantheae. Scientific Reports 7:7323

Jalonen R, Valette M, Boshier D, Duminil J, Thomas E (2017) Forest and landscape restoration severely constrained by a lack of attention to the quantity and quality of tree seed: insights from a global survey. Conservation Letters 11(4):e12424

de Kochko A, Hamon S, Guyot R, Couturon E, Poncet V, Dubreuil Tranchant C, Crouzillat D, Rigoreau M, Hamon P (2017). Omics applications : Coffee. In: Chowdappa P, Karun A, Rajesh MK, Ramesh SV (eds.) Biotechnology of plantation crops. New Delhi: Daya Publishing House, 589-606

Lompo D, Vinceti B, Gaisberger H, Konrad H, Duminil J, Ouedraogo M, Sina S, Geburek T (2017) Genetic conservation in Parkia biglobosa (Fabaceae: Mimosoideae) - what do we know? Silvae Genetica 66:1-8

Luebert F , Couvreur TLP, Gottschling M, Hilger HH, Miller JS, Weigend M (2017) Historical biogeography of Boraginales: West Gondwanan vicariance followed by long-distance dispersal? J. Biogeogr. 44:158-169

Maggia ME, Vigouroux Y, Renno JF, Duponchelle F, Desmarais E , Nunez J, Garcia-Davila C, Carvajal F, Paradis E, Martin JF, Mariac C (2017) DNA metabarcoding of Amazonian ichthyoplankton swarms. PlosOne 12(1):e0170009

Monthe FK, Hardy OJ, Doucet JL, Loo J, Duminil J (2017) Extensive seed and pollen dispersal in the rain forest tree Entandrophragma cylindricum (Meliaceae) inferred from indirect and direct analyses. Molecular Ecology 26:5279-5291

Monthe FS, Duminil J, Tosso F, Migliore J, Hardy OJ (2017) Characterization of microsatellite markers in two exploited African trees, Entandrophragma candollei and E. utile (Meliaceae). Applications in Plant Sciences 5(2):1600130

Moussouni S , Pintaud JC, Vigouroux Y, Bouguedoura N (2017) Diversity of Algerian oases date palm (Phoenix dactylifera L., Arecaceae): Heterozygote excess and cryptic structure suggest farmer management had a major impact on diversity. PLoS ONE 12(4):e0175232

Ndour PMS, Gueye M, Barakat M, Ortet P, Bertrand-Huleux M, Pablo AL, Dezette D, Chapuis Lardy L, Assigbetse K, Kane N, Vigouroux Y, Achouak W, Ndoye I, Heulin T, Cournac L (2017) Pearl millet genetic traits impact rhizobacterial diversity and rhizosphere soil aggregation. Front Plant Sci 8:1288

Onstein RE, Baker WJ, Couvreur TLP, Faubry S, Svenning JC, Kissling D (2017) Frugivory-related traits promote speciation of tropical palms. Nature Ecology and Evolution 1:1903-1911

Ousseini IS, Bakasso Y, Kane NA, Couderc M, Zekraoui L, Mariac C, Manicacci D, Rhoné B, Barnaud A, Berthouly-Salazar C, Assoumane A, Moussa D, Moussa T, Vigouroux Y (2017) Myosin XI is associated with fitness and adaptation to aridity in wild pearl millet. Heredity 119:88-94

Rhoné B, Mariac C, Couderc M, Berthouly-Salazar C, Ousseini IS, Vigouroux Y (2017) No excess of cis-regulatory variation associated with intra-specific selection in wild pearl millet (Cenchrus americanus). Genome Biology Evolution 9(2):388-397

Sanin MJ, Zapata P, Pintaud JC, Galeano G, Bohórquez A, Tohme J, Hansen MM (2017) Up and down the blind alley: population divergence with scant gene flow in an endangered tropical lineage of Andean palms (Ceroxylon quindiuense clade: Ceroxyloideae). J Hered 108(3):288-298

Sarah G, Homa F, Pointet S, Contreras S, Sabot F, Nabholz B, Santoni S, Sauné L, Ardisson M, Chantret N, Sauvage C, Tregear J, Jourda C, Pot D, Vigouroux Y, Chair H, Scarcelli N, Billot C, Yahiaoui N, Bacilieri R, Khadari B, Boccara M, Barnaud A, Péros JP, Labouisse JP, Pham JL, David J, Glémin S, Ruiz M (2016) A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives. Molecular Ecology Ressources 17:565-580

Scarcelli N, Chaïr H, Causse S, Vesta R, Couvreur T, Vigouroux Y (2017) Crop wild relative conservation: wild yams are not that wild. Biological Conservation 210:325-333

Sosef MSM, Dauby G, Blach-Overgaard A, van der Burgt X, Catarino L, Damen T, Deblauwe V, Dessein S, Dransfield J, Droissart V, Duarte MC, Engledow H, Fadeur G, Figueira R, Gereau RE, Hardy OJ, Harris DJ, de Heij J, Janssens S, Klomberg Y, Ley AC, Mackinder BA, Meerts P, van de Poel JL, Sonké B, Stévart T, Stoffelen P, Svenning JC, Sepulchre P, Zaiss R, Wieringa JJ, Couvreur TLP (2017) Exploring the floristic diversity of tropical Africa. BMC Biology 15:15

Stull GW, Johnson DM, Murray NA, Couvreur TLP, Reeger J, Roy CM (2017) Plastid and Seed Morphology Data Support a Revised Infrageneric Classification and an African Origin of the Pantropical Genus Xylopia (Annonaceae). American Society of Plant Taxonomists 42:211-225

Tournebize R, Manel S, Vigouroux Y, Munoz F, de Kochko A, Poncet V (2017) Two disjunct Pleistocene populations and anisotropic postglacial expansion shaped the current genetic structure of the relict plant Amborella trichopoda. PLoS One, 12, e0183412

Varshney R, Shi C, Thudi M, Mariac C, Wallace J, Qi P, Zhang H, Zhao Y, Wang X, Rathore A, Srivastava R, Chitikineni A, Fan G, Bajaj P, Punnuri S, Gupta S, Wang H, Jiang Y, Couderc M, Katta M, Paudel D, Mungra K, Chen W, Harris-Shultz K, Garg MV, Desai N, Doddamani D, Kane N, Conner J, Ghatak A, Chaturvedi P, Subramaniam S, Yadav O, Berthouly-Salazar C, Falalou H, Wang J, Liang X, Clotault J, Upadhyaya H, Cubry P, Rhoné B, Gueye M, Sunkar R, Dupuy C, Sparvoli F, Cheng S, Mahala R, Singh B, Yadav R, Lyons E, Datta S, Hash C, Devos K, Buckler E, Bennetzen J, Paterson A, Ozias-Akins P, Grando S, Wang J, Mohapatra T, Weckwerth W, Reif J, Liu X, Vigouroux Y, Xu X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology 35:969-984

Veranso-Libalah MC, Stone RD, Fongod AGN, Couvreur TLP, Kadereit G (2017) Phylogeny and systematics of African Melastomateae (Melastomataceae). Taxon 66:584-614

Vigouroux Y, Darmency H (2017) Assessing fitness parameters of hybrids between weed beets and transgenic sugar beets. Plant breeding 136:969-976