DIversité - Adaptation - DEveloppement des plantes


Ghodhbane-Gtari F, Nouioui I, Hezbri K, Lundstedt E, D'Angelo T, McNutt Z, Laplaze L, Gherbi H, Vaissayre V, Svistoonoff S, Ahmed HB, Boudabous A, Tisa LS (2019) The plant-growth-promoting actinobacteria of the genus Nocardia induces root nodule formation in Casuarina glaucaAntonie van Leeuwenhoek 112:75


Hoang TG, Dinh VL, Nguyen TT, Ta KN, Gathignol F, Mai DC, Jouannic S, Tran DK, Khuat HT, Do NV, Lebrun M, Courtois B, Gantet P (2019) Genome-wide association study of a panel of Vietnamese rice landraces reveals new QTLs for tolerance to water deficit during the vegetative phase. Rice 12:4


Nguyen LK, Grondin A, Courtois B, Gantet P (2018) Next-generation sequencing accelerates crop gene discovery. Trends in Plant Science 24:263 




Chi DT, Laplaze LGuyomarc'h S (2018) Lateral root development: building a meristem de novoAnnual Plant Review 1:1


Chu TTH, Hoang TG, Trinh DC, Bureau C, Meynard D, Vernet A, Ingouf M, Do NV, Perin C, Guiderdoni E, Gantet P,  Maurel C, Luu TD (2018) Sub-cellular markers highlight intracellular dynamics of membrane proteins in response to abiotic treatments in rice. Rice 11:23


Cissoko M, Hocher V, Gherbi H, Gully D, Carré-Mlouka A, Sane S, Pignoky S, Champion A, Ngom M, Pujic P, Fournier P, Gtari M, Swanson E, Pesce C, Tisa LS, Sy MO, Svistoonoff1 S (2018) Actinorhizal signaling molecules: Frankia root hair deforming factor shares properties with NIN inducing factor. Frontiers in Plant Science 9:1494


Debieu M, Sine B, Passot S, Grondin A, Akata E, Gangashetty P, Vadez VGantet P, Fonceka D, Cournac L, Hash CT, Kane NA, Vigouroux Y, Laplaze L (2018) Response to early drought stress and identification of QTLs controlling biomass production under drought in pearl millet. PLoS ONE 13:10


Djighaly PI, Diagne N, Ngom M, Ngom D, Hocher V, Fall D, Diouf D, Laplaze L, Svistoonoff S, Champion A (2018) Selection of arbuscular mycorrhizal fungal strains to improve Casuarina equisetifolia L. and Casuarinaglauca Sieb. tolerance to salinityAnnals of Forest Science 75:3


Grondin A, Dixit S, Torres R, Venkateshwarlu C, Rogers E, Mitchell-Olds T, Benfey, PN, Kumar A, Henry A (2018) Physiological mechanisms contributing to QTL qDTY3.2 effects on improved performance of rice Moroberekan x Swarna BC2F3:4 lines under drought. Rice 11:43


Hajjarpoor A, Soltani A, Zeinali E, Kashiri H, Aynehband A, Vadez V (2018) Using boundary line analysis to assess the on-farm crop yield gap of wheat. Field Crops Research 225:64


Hajjarpoor A, Vadez V, Soltani A, Gaur P, Whitbread A, Babu DS, Gumma MK,  Diancoumba M, Kholova J (2018) Characterization of the main chickpea cropping systems in India using a yield gap analysis approach. Field Crops Research 223:93


Hoang TG, Gathignol F, Le TD, Nguyen TT, Gantet P, Pham XH, Lebrun M (2018) Screening of salt tolerance potential of a panel of Vietnamese rice landraces at seedling stage. Journal of Vietnam Agricultural Science and Technology 1:27


Laplaze L, Sparvoli F, Masmoudi K, Hash CT (2018) Editorial: Harvesting plant and microbial biodiversity for sustainably enhanced food security. Front. Plant Sci. 9:42


Lavarenne J, Guyomarc'h S, Sallaud C, Gantet PLucas M (2018) The spring of systems biology-driven breeding. TRENDS in Plant Science 23:706 


Mbodj D, Effa-Effa B, Kane A, Manneh B, Gantet PLaplaze L, Diedhiou AG, Grondin A (2018) Arbuscular mycorrhizal symbiosis in rice: Establishment, environmental control and impact on plant growth and resistance to abiotic stresses. Rhizosphere 8:12


Passot S, Moreno-Ortega B, Moukouanga D, Balsera C, Guyomarc'h S,Lucas M, Lobet G, Laplaze L, Muller B, Guédon Y (2018) A new phenotyping pipeline reveals three types of lateral roots and a random branching pattern in two cereals. Plant Physiol. 177:896


Reynolds M, Kropff M, Crossa J, Koo J, Kruseman G, Molero Milan A, Rutkoski J, Schulthess U, Singh B, Sonder K, Tonnang H, Vadez V (2018) Role of Modelling in international crop research: Overview and some case studies. Agronomy 8:291


Sivasakthi K, Thudi M, Tharanya M, Kale SM, Kholova J, Halime MH, Jaganathan D, Baddam R, Thirunalasundar T, Gaur PM, Varshney RK, Vadez V (2018) Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome. BMC Plant Biology 18:29 


Ta KN, Khong NG, Ha TL, Nguyen DT, Mai DM, Hoang TG, Phung TPN, Bourrie I, Courtois B, Tran TTH, Dinh BY, La TN, Do NV, Lebrun M, Gantet P, Jouannic S (2018) A Genome-wide association study using a Vietnamese landrace panel of rice (Oryza sativa) reveals new QTLs controlling panicle morphological traitsBMC Plant Biology 18:282 


Tharanya M, Kholova J, Sivasakthi K, Seghal D, Hash CT, Raj B, Srivastava RK, Baddam R, Thirunalasundari T, Yadav R, Vadez V (2018) Quantitative trait loci (QTLs) for water use and crop production traits colocate with major QTL for tolerance to water deficit in a fine mapping population of pearl millet (Pennisetum glaucum L.R.Br.). Theoretical and Applied Genetics 131:1509


Tharanya M, Sivasakthi K, Barzana G, Thirunalasundari T, Vadez V (2018) Pearl millet (Pennisetum glaucum) contrasting for the transpiration response to vapour pressure deficit also differ in their dependence on the symplastic and apoplastic water transport pathways. Functional Plant Biology 45:719 


von Wettberg EJB, Chang PL, Basdemir F, Carrasquila-Garcia N,  Korbu LB, Moenga SM, Bedada G, Greenlon A, Moriuchi KS, Singh V, Cordeiro MA, Noujdina NV, Dinegde KN, Sani SGAS, Getahun T, Vance L, Bergmann E, Lindsay D, Mamo BE, Warschefsky EJ, Dacosta-Calheiros E, Marques E, Yilmaz MA, Cakmak A, Rose J, Migneault A, Krieg CP,  Saylak S, Temel H, Friesen ML, Siler E, Akhmetov Z, Ozcelik H, Kholova J, Can C, Gaur PM,  Yildirim Mm Sharma HC, Vadez V, Tesfaye K, Woldemedhin AF, Tar'an B, Aydogan A,  Bukun B,  Penmetsa RV, Berger J, Kahraman A, Nuzhdin SV, Cook DR (2018) Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation. Nature Communications 9:649




CacasJL, PréM, PizotM, CissokoM, DiedhiouI, JalloulA, DoumasP, Nicole N, Champion A (2017) GhERF-IIb3 regulates accumulation of jasmonate and leads to enhanced cotton resistance to blight disease. Molecular Plant Pathology 18:825


Debieu M, Kanfany G, Laplaze L (2017) Pearl millet genome: Lessons from a tough crop. Trends in Plant Science 22:911


Makhzoum A, Malik S, Yousefzadi M, Gantet P, Tremouillaux-Guiller (2017) Strigolactones biology: genes, functional genomics, epigenetics and applications. Critical Reviews in Biotechnology 37:151


Medina S, Gupta SK, Vadez V (2017) Transpiration Response and Growth in pearl millet parental lines and hybrids bred for contrasting rainfall environments. Frontiers in Plant Science 8:1846


Ndour A, Vadez V, Pradal C, Lucas M (2017) Virtual plants need water too: Functional-structural root system models in the context of drought tolerance breeding. Frontiers in Plant Sciences 8:1577


Oshone R, Ngom M, Chu F, Mansour S, Sy MO, Champion A, Tisa LS (2017) Genomic, transcriptomic, and proteomic approach towards understanding the molecular mechanisms of salt tolerance in Frankia strains isolated from Casuarina trees. BMC Genomics 18:633


Rodrigues O, Reshetnyak G, Grondin A, Saijo Y, Leonhardt N, Maurel C, Verdoucq L (2017) Aquaporins facilitate hydrogen peroxide entry into guard cells to mediate ABA- and pathogen-triggered stomatal closure. Proceedings of the National Academy of Sciences 114:9200


Sinclair TR, Devi J, Shekoofa A, Choudhary S, Sadok W, Vadez V, Riar M, Rufty T (2017) Limited-transpiration response to high vapor pressure deficit in crop species. Plant Science 260:109


Sivasakthi K, Tharanya M, Kholová J, Wangari Muriuki R, Thirunalasundari T, Vadez V (2017) Chickpea genotypes contrasting for vigor and canopy conductance also differ in their dependence on different water transport pathways. Front. Plant Sci. 8:1663


Sivasakthi K, Zaman-Allah M, Tharanya M, Kholová J, Thirunalasundari T, Vadez V (2017) Chickpea. In: Sinclair T. (eds) Water-conservation traits to increase crop yields in water-deficit environments. Pp 73-83. SpringerBriefs in Environmental Science. Springer, Cham.


Ta KN, Adam H, Staedler MY, Schoenenberger J, Harrop T, Tregear WJ, Do NV, Gantet P, Ghesquière A, Jouannic S (2017) Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated african rice. EvoDevo 8:2 


Tharanya M, Kholová J, Sivasakthi K, Thirunalasundari T, Vadez V (2017) Pearl Millet. In: Sinclair T. (eds) Water-conservation traits to increase crop yields in water-deficit environments. Pp 35-45. SpringerBriefs in Environmental Science. Springer, Cham.


Vadez V, Halilou O, Hissene HM, Sibiry-Traore P, Sinclair TR, Soltani A (2017) Mapping water stress incidence and intensity, optimal plant populations, and cultivar duration for african groundnut productivity enhancement. Front. Plant Sci. 8:432




Chabaud M, Gherbi H, Pirolles E, Vaissayre V, FournierJ, Moukouanga D, Franche C, Bogusz D, Tisa L, Barker D, Svistoonoff S (2016) Chitinase-resistant hydrophilic symbiotic factors secreted by Frankia activate both Ca2+ spiking and NIN gene expression in the actinorhizal plant Casuarina glaucaNew Phytologist 209:86


Diedhiou AG, Mbaye FK, Mbodj D, Faye MN, Pignoly S, Ndoye I, Djaman K, Gaye S, Kane A, Laplaze L, Manneh B, Champion A (2016) Field trials reveal ecotype-specific responses to mycorrhizal inoculation in rice. PLoS ONE 11:e0167014


Goh T, Toyokura K, Wells DM, Swarup K, Yamamoto M, Mimura T, Weijers D, Fukaki H, Laplaze L,Bennett MJ, Guyomarc'h S (2016) Quiescent center initiation in the Arabidopsis lateral root primordia is dependent on the SCARECROW transcription factor. Development 143:3363


Hanin M, Ebel C, Ngom M, Laplaze L, Masmoudi M (2016) New insights on plant salt tolerance mechanisms and their potential use for breeding. Front. Plant Sci. 7:1787


Lavenus J, Guyomarc’h SLaplaze L (2016) PIN transcriptional regulation shapes root system architecture. Trends in Plant Sciences 21:175


Ngom M, Gray K, Diagne N, Oshone R, Fardoux J, Gherbi H, Hocher V, Svistoonoff S, Laplaze L, Tisa LS, Sy MO, Champion A (2016) Symbiotic performance of diverse Frankia strains on salt-stressed Casuarina glauca and Casuarina equisetifolia plants. Frontiers in Plant Science 7:1331


Ngom M, Oshone R, Diagne N, Cissoko M, Svistoonoff S, Tisa L, Laplaze L, Sy MO, Champion A (2016) Tolerance to environmental stress by the nitrogen-fixing actinobacterium Frankia and its role in actinorhizal plants adaptation. Symbiosis 70:17


Ngom M, Oshone R, Hurst S, Abebe-Akele F, Simpson S, Morris K, Sy MO, Champion A, Thomas W, Tisa LS (2016) Permanent draft genome sequence for Frankia sp. strain CeD, a nitrogen-fixing Actinobacterium isolated from the root nodules of Casuarina equistifolia grown in Senegal. Genome Announcement 4:e00265-16


Oshone R, Ngom M, Abebe-Akele F, Simpson S, Morris K, Sy MO, Champion A, Thomas W, Tisa LS (2016) Permanent draft genome sequences for Frankia sp. strain Allo2, a salt-tolerant nitrogen-fixing Actinobacterium isolated from the root nodules of AllocasuarinaGenome Announcement 4:e00388-16 


Passot S, Gnacko F, Moukouanga D,Lucas M,Guyomarc'h S, Moreno Ortega B, Atkinson J, Niang M, Bennett M, Gantet P, Wells DM, Guédon Y, Vigouroux Y, Verdeil JL, Muller B, Laplaze L (2016) Characterization of pearl millet root architecture and anatomy reveals three types of lateral roots. Front. Plant Sci. 7:829


Phung NTP, Mai CD, Hoang GT, Truong HTM, Lavarenne J, Gonin M, Nguyen KL, Ha TT, Do VN, Gantet P, Courtois B (2016) Genome-wide association mapping for root traits in a panel of rice accessions from Vietnam. BMC Plant Biology 16:64


Poonlaphdecha J, Gantet P, Maraval I, Sauvage FX, Menut C, Morere A, Boulanger R, Wust M, Gunata Z (2016) Biosynthesis of 2-acetyl-1-pyrroline in rice calli cultures: Demonstration of 1-pyrroline as a limiting substrate. Food Chemistry 197:965


Selvakesavan RK, Dhanya NN, Thushara P, Abraham SM, Jayaraj RSC, Balasubramanian A, Deeparaj B, Sudha S, Sowmiya Rani KS, Bachpai VKW, Ganesh D, Diagne N, Laplaze L, Gherbi H, Svistoonoff S, Hocher V, Franche C, Bogusz D, Nambiar-Veetil M (2016) Intraspecies variation in sodium partitioning, potassium and proline accumulation under salt stress in Casuarina equisetifolia Forst. Symbiosis 70:117


Ta KN, Sabot F, Adam H, Vigouroux Y, De Mita S, Ghesquière A, Do, NV, Gantet P, Jouannic S (2016) miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species. Rice 9:10




Bellafiore S, Jougla C, Chapuis E, Besnard G, Suong M, Nguyen VP, De Waele D, Gantet P, Ngo TX (2015) Intraspecific variability of the facultative meiotic parthenogenetic root-knot nematode (Meloidogyne graminicola) from rice fields in Vietnam. C. R. Biologies 338:471


Champion ALucas M, Tromas A, Vaissayre V, Crabos A, Diedhiou I, Prodjinoto H, Moukouanga D, Pirolles E, Cissoko M, Bonneau J, Gherbi H, Franche C, Hocher V, Svistoonoff S, Laplaze L (2015) Inhibition of auxin signaling in Frankia-infected cells in Casuarina glaucanodules leads to increased nodulation. Plant Physiology 167:1149


Clavijo F, Diedhiou I, Vaissayre V, Brottier L, Acolatse J, Moukouanga D, Crabos A, Auguy F, Franche C, Gherbi H,Champion A, Hocher V, Barker D, Bogusz D, Tisa LS, Svistoonoff S (2015) The Casuarina NIN gene is transcriptionally activated throughout Frankia root infection as well as in response to bacterial diffusible signals. New Phytologist 208:887


Coudert Y, Le Thi VA, Adam H, Bes M, Vignols F, Jouannic S, Guiderdoni E, Gantet P (2015) Identification of CROWN ROOTLESS1-regulated genes in rice reveals specific and conserved elements of post-embryonic root formation. New Phytologist 206:243


Fahr M, Laplaze L, El Mzibri M, Doumas P, Bendaou N, Hocher V, Bogusz D, Smouni A (2015) Lead tolerance and accumulation in metallicolous and non-metallicolous populations of Hirschfeldia incanaExperimental & Environmental Botany 109:186


Hoang TG, Mai DC, Nguyen TH, Lavarenne J, Gonin M, Nguyen TH, Do NV, Gantet P (2015) Optimization of transformationprotocol for Japonica rice cv. Taichung 65 through Agrobacterium tumefaciensJ. Sci. Dev. 13:764 (in Vietnamese) 


Jalloul A, Sayegh M, Champion A, Nicole M (2015) Bacterial blight of cotton. Phytopathologia Mediterranea 54:3-20


Khong NG, Pati PK, Richaud F, Parizot B, Bidzinski P, Mai DC, Bes M, Bourrie I, Meynard D, Beeckman T, Gomez Selvaraj M, Manabu I, Genga AM, Brugidou C, Do NV, Guiderdoni E, Morel JB, Gantet P (2015) OsMADS26 negatively regulates resistance to pathogens and drought tolerance in rice. Plant Physiology 169:2935 


Laplaze LLucas MChampion A (2015) Rhizobial root hair infection requires auxin signaling. Trends in Plant Sciences 20:332


Larrieu A, Champion A, Legrand J, Lavenus J, Mast D, Brunoud G, Oh J, Guyomarc'h S, Pizot M, Farmer EE, Turnbull C, Vernoux T, Bennett MJ, Laplaze L (2015) A fluorescent hormone biosensor reveals the dynamics of jasmonate signalling in plants. Nature Communication 6:6043


Lavenus J, Goh T, Guyomarc'h S, Hill K, Lucas M, Voss U, Kenobi K, Wilson M, Farcot E, Hagen G, Guilfoyle TJ, Fukaki H, Laplaze L, Bennett MJ (2015) Inference of the Arabidopsis lateral root gene regulatory network reveals a bifurcation mechanism that defines primordia flanking and central zones. The Plant Cell 27:1368


Ngom M, Diagne N, Laplaze LChampion A, Sy MO (2015) Symbiotic ability of diverse Frankiastrains on Casuarina glaucaplants in hydroponic conditions. Symbiosis 70:79


Nguyen TD, Lacombe S, Bangratz M, Ta HA, Do NV, Gantet P, Brugidou C (2015) p2 of rice grassy stunt virus (RGSV) and p6 and p9 of rice ragged stunt virus (RRSV) isolates from Vietnam exert suppressor activity on the RNA silencing pathway. Virus Genes 51:267


Voß U, Wilson M, Kenobi K, Gould P, Robertson F, Peer WA, Lucas M, Swarup K, Casimiro I, Holman T, Wells D, Peret B, Goh T, Fukaki H, Hodgman C, Laplaze L, Halliday K, Ljung K, Murphy A, Hall A, Webb A, Bennett MJ (2015) Lateral root organ initiation re-phases the circadian clock in Arabidopsis thalianaNature Communications 6:7641

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